Paper Publications
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[1] 王明凯. RabbitTrim:highly optimized trimming ofIllumina sequencing data on multi-core platforms. 2024.
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[2] 闫立峰. RabbitQCPlus: More Efficient Quality Control for Sequencing Data. 2022.
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[3] Yan, Lifeng. RabbitQCPlus 2.0: More efficient and versatile quality control for sequencing data. METHODS, 216, 39-50, 2023.
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[4] 徐晓明. RabbitKSSD: Accelerating genome distance estimation on modern multi-core architectures. Bioinformatics, 39, 2023.
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[5] Xu, Borui. Leveraging Data Density and Sparsity for Efficient SVM Training on GPUs. 698-707, 2023.
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[6] Zhang, Hao. DeepFilter: A Deep Learning Based Variant Filter for VarDict. TSINGHUA SCIENCE AND TECHNOLOGY, 28, 665-672, 2023.
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[7] 许凯. Redesigning and Optimizing UCSF DOCK3.7 on Sunway TaihuLight. IEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS, 33, 2022.
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[8] 张浩. RabbitFX: Efficient Framework for FASTA/Q File Parsing on Modern Multi-Core Platforms. IEEE/ACM , 2022.
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[9] Xu, Xiaoming. RabbitTClust: enabling fast clustering analysis of millions of bacteria genomes with MinHash sket.... GENOME BIOLOGY, 24, 2023.
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[10] 徐博瑞. A Multi-scale Convolution and Gated Recurrent Unit Based Network for Limit Order Book Prediction. 2022.
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[11] 张浩. RabbitV: fast detection of viruses and microorganisms in sequencing data on multi-core architectu.... Bioinformatics, 2022.
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[12] 刘卫国. LMFF: Efficient and Scalable Layered Materials Force Field on Heterogeneous Many-Core Processors. 2021.
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[13] 刘卫国. RabbitQC: high-speed scalable quality control for sequencing data. Bioinformatics, 2020.
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[14] 刘卫国. RabbitMash: accelerating hash-based genome analysis on modern multi-core architectures. Bioinformatics, 2020.
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[15] 刘卫国. Optimization of Reactive Force Field Simulation: Refactor, Parallelization, and Vectorization for.... IEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS, 2022.
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[16] 刘卫国. Cell-List based Molecular Dynamics on Many-Core Processors: A Case Study on Sunway TaihuLight Sup.... 2020.
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[17] 高萍. Millimeter-Scale and Billion-Atom Reactive Force Field Simulation on Sunway Taihulight. IEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS, 31, 2954, 2020.
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[18] 许凯. FMapper: Scalable read mapper based on succinct hash index on SunWay TaihuLight. Journal of Parallel and Distributed Computing, 161, 72, 2022.
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[19] 李新. SWMapper: Scalable Read Mapper on SunWay TaihuLight. 2020.
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[20] Weiguo Liu , liuhui and 刘卫国. Efficient Parallel Sort on AVX-512-based Multi-core and Many-core Architectures. 2019.