Biography

孙端辰,1990年生,教授、博士生导师。2012年毕业于山东师范大学数学与统计学院信息与计算科学专业,获学士学位。2017年毕业于中国科学院数学与系统科学研究院运筹学与控制论专业,获博士学位(导师:吴凌云研究员)。博士毕业后,于2017年7月至2021年8月赴美国俄勒冈健康与科学大学医学院读博士后,研究方向为生物信息学。2022年入职山东大学数学学院。

主要从事数学、机器学习与前沿生物医学问题交叉研究,工作涉及生物信息学大数据分析等领域。在生物标记物的识别,单细胞数据的计算问题等研究上取得了一系列成果。目前已在包括Nature Biotechnology (IF:68.2)、Nature Communications (IF: 17.7)、Briefings in Bioinformatics (IF:14.0)、Clinical Cancer Research (IF:13.8) 等国际著名学术期刊上发表SCI论文二十余篇。


Education
  • 2012/09/01-2017/06/30
    中国科学院数学与系统科学研究院
    运筹学与控制论
  • 2008/09/01-2012/06/30
    山东师范大学
    信息与计算科学
Professional Experience
  • 2017-7 — 2021-8
     Oregon Health & Science University 
Publication
Research direction
Papers

(1) Jiating Yu. Incorporating network diffusion and peak location information for better single-cell ATAC-seq data analysis .Briefings in Bioinformatics .2024 ,25 (2)

(2) Yang, Jiaxin. Multi-objective Optimization-Based Approach for Detection of Breast Cancer Biomarkers .2023 ,14088 LNCS :716-726

(3) Sun, Chenxi. Detecting Autism Spectrum Disorder from Functional Magnetic Resonance Imaging Data with an Ensemble Machine Learning Method .2023 :13-20

(4) Zhang, Chunxiao. MOFNet: A Deep Learning Framework of Integrating Multi-omics Data for Breast Cancer Diagnosis .2023 ,14088 LNCS :727-738

(5)  CDK9 inhibition induces epigenetic reprogramming revealing strategies to circumvent resistance in lymphoma .Mol Cancer .2023 ,22 (1)

(6) Yu, Jiating. Network Refinement: Denoising complex networks for better community detection .PHYSICA A .2023 ,617

(7) Wang, Chuanyuan. ActivePPI: quantifying protein-protein interaction network activity with Markov random fields .Bioinformatics (Oxford, England) .2023 ,39 (9)

(8)  Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data .Nature Biotechnology .2021

(9)  Postpartum breast cancer has a distinct molecular profile that predicts poor outcomes .Nature Communications .2021

(10)  BET bromodomain inhibition blocks an AR-Repressed, E2F1-Activated treatment-emergent neuroendocrine prostate cancer lineage plasticity program .Clinical Cancer Research .2021

(11)  Discovering cooperative biomarkers for heterogeneous complex disease diagnoses .Briefings in Bioinformatics .2019

Student Information
  • 白鑫桐  2023/09/23 Hits:[] Times
  • 管齐元  2023/09/23 Hits:[] Times
  • 王滢  2023/09/23 Hits:[] Times
  • 潘婕怡  2023/09/23 Hits:[] Times
  • 周庆斌  2023/09/23 Hits:[] Times
  • 赵金月  2023/09/23 Hits:[] Times
  • 冯丽颖  2023/09/23 Hits:[] Times
  • 崔欣利  2023/09/23 Hits:[] Times
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