Duanchen Sun
Professor
孙端辰，1990年生，教授、博士生导师。2012年毕业于山东师范大学数学与统计学院信息与计算科学专业，获学士学位；2017年毕业于中国科学院数学与系统科学研究院运筹学与控制论专业，获博士学位（导师：吴凌云研究员）；2017年7月至2021年8月在俄勒冈健康与科学大学（OHSH）奈特癌症研究所开展博士后研究，研究方向为生物信息学。2022年加入山东大学数学学院，获聘山东大学齐鲁青年学者（第一层次）。 主要从事数学、信息科学与前沿生物医学问题的交叉研究。围绕复杂疾病建模中... More+
Paper Publications
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[1] Li, Yunhai. Predicting Drug-Target Affinity Using Protein Pocket and Graph Convolution Network. 20th International Symposium on Bioinformatics Research and Applications, ISBRA 2024, 14954 LNBI, 1-12, 2024.
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[2] Yu, Jiating. Reverse network diffusion to remove indirect noise for better inference of gene regulatory networks. Bioinformatics, 40, 2024.
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[3] 吴秋琴. Identification of DNA motif pairs on paired sequences based on composite heterogeneous graph. Frontiers in Genetics, 15, 2024.
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[4] Jiating Yu. Incorporating network diffusion and peak location information for better single-cell ATAC-seq data analysis. Briefings in Bioinformatics, 25, 2024.
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[5] Yang, Jiaxin. Multi-objective Optimization-Based Approach for Detection of Breast Cancer Biomarkers. 19th International Conference on Intelligent Computing, ICIC 2023, 14088 LNCS, 716-726, 2023.
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[6] Sun, Chenxi. Detecting Autism Spectrum Disorder from Functional Magnetic Resonance Imaging Data with an Ensemble Machine Learning Method. 5th International Conference on Intelligent Medicine and Image Processing, IMIP 2023, 13-20, 2023.
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[7] Zhang, Chunxiao. MOFNet: A Deep Learning Framework of Integrating Multi-omics Data for Breast Cancer Diagnosis. 19th International Conference on Intelligent Computing, ICIC 2023, 14088 LNCS, 727-738, 2023.
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[8] . CDK9 inhibition induces epigenetic reprogramming revealing strategies to circumvent resistance in lymphoma. Mol Cancer, 22, 2023.
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[9] Yu, Jiating. Network Refinement: Denoising complex networks for better community detection. PHYSICA A, 617, 2023.
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[10] Wang, Chuanyuan. ActivePPI: quantifying protein-protein interaction network activity with Markov random fields. Bioinformatics (Oxford, England), 39, 2023.
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[11] Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data. Nature Biotechnology, 2021.
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[12] Postpartum breast cancer has a distinct molecular profile that predicts poor outcomes. Nature Communications, 2021.
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[13] BET bromodomain inhibition blocks an AR-Repressed, E2F1-Activated treatment-emergent neuroendocrine prostate cancer lineage plasticity program. Clinical Cancer Research, 2021.
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[14] Discovering cooperative biomarkers for heterogeneous complex disease diagnoses. Briefings in Bioinformatics, 2019.