• Wenkai Wang, Baoquan Su, Zhenling Peng and Jianyi Yang. Integrated experimental and AI innovations for RNA structure determination.  Nature Biotechnology,  2026. 

• Wenkai Wang and Jianyi Yang. trRosettaRNA: automated prediction of RNA 3D structure with transformer network.  Nature Communications,  2023. 

• Wenkai Wang and Jianyi Yang. Single-sequence protein structure prediction using supervised transformer protein language models.  Nature Computational Science,  2022. 

• Wenkai Wang, Yuxian Luo, Zhenling Peng and 杨建益. Accurate biomolecular structure prediction in CASP16 with optimized inputs to state-of-the-art predictors.  Proteins: Structure, Function, and Bioinformatics,  2026. 

• Wenkai Wang, Baoquan Su, Chenxiao Xiang and 杨建益. Opportunities and challenges in protein structure prediction.  Quantitative Biology,  2026. 

• Chenxiao Xiang, Wenkai Wang, Zhenling Peng and 杨建益. Generating dynamic structures through physics-based sampling of predicted inter-residue geometries.  Advanced Science,  2026. 

• Hong Su#, Wenkai Wang#(Co-first author) and Jianyi Yang. Improved protein structure prediction using a new multi-scale network and homologous templates.  Advanced Science,  2021. 

• Zhenling Peng#, Wenkai Wang#(Co-first author) and Jianyi Yang. Protein structure prediction in the deep learning era.  Current Opinion in Structural Biology,  2022. 

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• 博士后面上项目，8万，主持

• 国家基金委青年科学基金项目（C类），30.0万元，2026.01-2028.12，主持

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