Paper Publications
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[41] Weiguo Liu and 刘卫国. XMapper - A Parallel Full Comprehensive DNA Read Mapping Algorithm Based on Intel Xeon and Xeon P.... CCF 2015全国高性能计算学术年会, 2015.
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[42] Weiguo Liu and 刘卫国. Parallel algorithms for large-scale biological sequence alignment on Xeon-Phi based clusters. BMC Bioinformatics, 2016.
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[43] Weiguo Liu and 刘卫国. Parallel Monte Carlo Option Pricing Algorithms on Hybrid Heterogeneous Many-Core Architectures. HPC China 2014, 2014.
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[44] Weiguo Liu and 刘卫国. Using Graphics Hardware to Accelerate Motif Finding in DNA Sequences. International Conference on Pattern Recognition in Bioinformatics, 2008.
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[45] Weiguo Liu and 刘卫国. Accelerating Error Correction in High-Throughput Short-Read DNA Sequencing Data with CUDA. IEEE International Parallel & Distributed Processing Symposium, 2009.
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[46] Weiguo Liu and 刘卫国. Quality-Score Guided Error Correction for Short-Read Sequencing Data using CUDA. The International Conference on Computational Science, 2010.
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[47] Weiguo Liu and 刘卫国. Mapping of BLASTP Algorithm onto GPU Clusters. IEEE International Conference on Parallel and Distributed Systems, 2011.
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[48] Weiguo Liu and 刘卫国. Accelerating Molecular Dynamics Simulations using Graphics Processing Units with CUDA. Computer Physics Communications, 2008.
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[49] Weiguo Liu and 刘卫国. CUDA-BLASTP: Accelerating BLASTP on CUDA-enabled Graphics Hardware. IEEE/ACM transactions on computational biology and bioinformatics, 2011.
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[50] Weiguo Liu and 刘卫国. Accelerating de Bruijn Graph-based Genome Assembly for High-Throughput Short Read Data. IEEE International Conference on Parallel and Distributed Systems, 2013.
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[51] Weiguo Liu , gongbin and 刘卫国. GCMR: A GPU Cluster-based MapReduce Framework for Large-scale Data Processing. IEEE International Conference on High Performance Computing and Communications, 2013.
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[52] Weiguo Liu and 刘卫国. A New Parallel PROSITE Profile Search Algorithm on Xeon Phi. IEEE International Conference on Bioinformatics and Biomedicine, 2014.
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[53] Weiguo Liu and 刘卫国. XSW: Accelerating Biological Database Search on Xeon Phi. IEEE International Parallel & Distributed Processing Symposium, 2014.
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[54] Weiguo Liu and 刘卫国. HiPGA: A High Performance Genome Assembler for Short Read Sequence Data. IEEE International Parallel & Distributed Processing Symposium, 2014.
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[55] Weiguo Liu and 刘卫国. A Dynamic Hashing approach to build de Bruijn graph for genome assembly. IEEE TENCON 2013, 2013.
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[56] 刘卫国. SPECTR: Scalable Parallel Short Read Error Correction on Multi-core and Many-core Architectures. 2018.
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[57] 刘卫国. MyPhi: Efficient Levenshtein Distance Computation on Xeon Phi based Architectures. Current Bioinformatics, 2018.
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[58] 刘卫国. End-to-end I/O Monitoring on a Leading Supercomputer. 2019.
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[59] 刘卫国. Fast and efficient short read mapping based on a succinct hash index. BMC Bioinformatics, 2018.
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[60] 刘卫国. BGSA: A Bit-Parallel Global Sequence Alignment Toolkit for Multi-core and Many-core Architectures. Bioinformatics, 2018.